Publications

Bayesian Structured Prediction Using Gaussian Processes

Sébastien Bratières, Novi Quadrianto, Zoubin Ghahramani, 2013. (arXiv).

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We introduce a conceptually novel structured prediction model, GPstruct, which is kernelized, non-parametric and Bayesian, by design. We motivate the model with respect to existing approaches, among others, conditional random fields (CRFs), maximum margin Markov networks (M3N), and structured support vector machines (SVMstruct), which embody only a subset of its properties. We present an inference procedure based on Markov Chain Monte Carlo. The framework can be instantiated for a wide range of structured objects such as linear chains, trees, grids, and other general graphs. As a proof of concept, the model is benchmarked on several natural language processing tasks and a video gesture segmentation task involving a linear chain structure. We show prediction accuracies for GPstruct which are comparable to or exceeding those of CRFs and SVMstruct.

Scalable Gaussian Process Structured Prediction for Grid Factor Graph Applications

Sébastien Bratières, Novi Quadrianto, Sebastian Nowozin, Zoubin Ghahramani, 2014. (In 31st International Conference on Machine Learning).

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Structured prediction is an important and well studied problem with many applications across machine learning. GPstruct is a recently proposed structured prediction model that offers appealing properties such as being kernelised, non-parametric, and supporting Bayesian inference (Bratières et al. 2013). The model places a Gaussian process prior over energy functions which describe relationships between input variables and structured output variables. However, the memory demand of GPstruct is quadratic in the number of latent variables and training runtime scales cubically. This prevents GPstruct from being applied to problems involving grid factor graphs, which are prevalent in computer vision and spatial statistics applications. Here we explore a scalable approach to learning GPstruct models based on ensemble learning, with weak learners (predictors) trained on subsets of the latent variables and bootstrap data, which can easily be distributed. We show experiments with 4M latent variables on image segmentation. Our method outperforms widely-used conditional random field models trained with pseudo-likelihood. Moreover, in image segmentation problems it improves over recent state-of-the-art marginal optimisation methods in terms of predictive performance and uncertainty calibration. Finally, it generalises well on all training set sizes.

Scaling the iHMM: Parallelization versus Hadoop

Sébastien Bratières, Jurgen Van Gael, Andreas Vlachos, Zoubin Ghahramani, 2010. (In Proceedings of the 2010 10th IEEE International Conference on Computer and Information Technology). Bradford, UK. IEEE Computer Society. DOI: 10.1109/CIT.2010.223. ISBN: 978-0-7695-4108-2.

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This paper compares parallel and distributed implementations of an iterative, Gibbs sampling, machine learning algorithm. Distributed implementations run under Hadoop on facility computing clouds. The probabilistic model under study is the infinite HMM Beal, Ghahramani and Rasmussen, 2002, in which parameters are learnt using an instance blocked Gibbs sampling, with a step consisting of a dynamic program. We apply this model to learn part-of-speech tags from newswire text in an unsupervised fashion. However our focus here is on runtime performance, as opposed to NLP-relevant scores, embodied by iteration duration, ease of development, deployment and debugging.

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